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| Home > Departments > Center for Experimental Medicine > Department of Computational Neuroscience > Research > atlas-based 3D Segmentation of Anatomical Image Structures Using Algorithms for Non-Linear Registration

Atlas-Based 3D Segmentation of Anatomical Image Structures using Algorithms for Non-Linear Registration

Abstract:

Two three-dimensional digitized atlases of a female and a male pelvis were generated to support the virtual 3D-planning of hip operations. Beside the anatomical labeling of bone structures the determination of orthopedic measures, like angles, distances or sizes of contact areas, is important for the planning of hip operations. Thus, each atlas consists of labeled reference CT data sets, a set of landmarks as well as definitions of orthopedic measures and methods for their automatic computation. Furthermore, methods for the automatic transfer of anatomical labels from the atlas to an individual data set are presented resulting in three-dimensional models of the patient's bone structures. The anatomical atlases are designed to replace the interactive, time-consuming pre-processing steps for the virtual 3D operation planning.

Selected Publications:

Jan Ehrhardt: Atlasbasierte Erkennung anatomischer Strukturen und Landmarken für die dreidimensionale virtuelle Planung von Hüftoperationen. Books on Demand, Norderstedt, 2005.

Jan Ehrhardt, Heinz Handels, Werner Plötz, Siegfried J. Pöppl: Atlas-based recognition of anatomical structures and landmarks and the automatic computation of orthopedic parameters to support the virtual planning of hip operations. Meth. Inform. Med.43 (2004), 391-397.

Ehrhardt J, Handels H, Malina T, Strathmann B, Plötz W, Pöppl SJ: Atlas-based Recognition of Anatomical Structures and Landmarks to Support the Virtual Three-dimensional Planning of Hip Operations. In: Ellis RE, Peters TM (eds), 6th International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2003, Montreal, Part I, 17-24, Springer, Berlin.

Ehrhardt, J., Handels, H., Wegner, T., Strathmann, B., Plötz, W., Pöppl, S. J. : An Anatomical Atlas to Support the Virtual Planning of Hip Operations. In: Hasman, A., Blobel, B., Dudeck, J., Engelbrecht, R., Gell, G., Prokosh, H.-U. (eds.) Proceedings of MIE 2000 and GMDS 2000, IOS Press, Amsterdam, 1226-1230, 2000

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